io.github.cyanheads/uniprot-mcp-server
io.github.cyanheads/uniprot-mcp-server
Tools
Exactly what the server advertised in the scan completed . Effects and capabilities are classified by Squatch from each tool's metadata. Squatch never runs tools.
- Effect: Read 6
Showing 6 of 6 tools
| Details | ||
|---|---|---|
| uniprot_get_entry Fetch full curated UniProtKB entries by accession in one batch (up to 20). Each entry carries function, catalytic activity, cofactors, subc… | Effect: Read | |
| uniprot_get_proteome Fetch the reference proteome for an organism by UPID (e.g. "UP000005640") or NCBI taxon ID (e.g. 9606) — provide exactly one. Returns metad… | Effect: Read | |
| uniprot_get_sequence Fetch the canonical amino-acid sequence (FASTA) for a UniProtKB accession, with length and the parsed header. Set include_isoforms to also … | Effect: Read | |
| uniprot_get_taxonomy Resolve a taxonomy record by NCBI taxon ID (e.g. 9606) or organism name (e.g. "Homo sapiens" or "human") — provide exactly one. Exact case-… | Effect: Read | |
| uniprot_map_ids Translate identifiers across databases via UniProt's ID-mapping service — gene names to accessions, accession to PDB / Ensembl / RefSeq / C… | Effect: Read | |
| uniprot_search_proteins Search UniProtKB and return curated protein records. Pass text_search for a plain-language query (the 80% case) or query for the full Lucen… | Effect: Read |