io.github.cyanheads/biorxiv-mcp-server
io.github.cyanheads/biorxiv-mcp-server
MCP Bill of Materials
A machine-readable inventory of what this server exposes and depends on: tools with their effects, transports, packages, findings and provenance (schema version 1.0). Third-party text in it is escaped. Also available from the REST API at /api/v1/servers/7f236570-df07-476f-bd99-a4a82e0db792/mcbom.
MCP Bill of Materials
root{21}
schema_version: "1.0"
bom_format: "squatch-mcbom"
generator{3}
name: "squatch-mcp"
classifier_version: "rules_v1@2026-10-11.1"
unicode_version: "18.0.0"
server{7}
name: "io.github.cyanheads/biorxiv-mcp-server"
title: null
description: "Search and retrieve bioRxiv and medRxiv preprints — by DOI, date interval, or keyword — via MCP."
version: "0.5.1"
homepage_url: null
source: "official_registry"
upstream_status: "active"
publisher{4}
namespace: "io.github.cyanheads"
display_name: "io.github.cyanheads"
type: "registry_namespace"
status: "unclaimed"
organization: null
repository{5}
url: "https://github.com/cyanheads/biorxiv-mcp-server"
provider: "github"
owner: "cyanheads"
name: "biorxiv-mcp-server"
verified: false
packages[2]
0{4}
registry_type: "npm"
identifier: "@cyanheads/biorxiv-mcp-server"
version: "0.5.1"
transport: "stdio"
1{4}
registry_type: "npm"
identifier: "@cyanheads/biorxiv-mcp-server"
version: "0.5.1"
transport: "streamable-http"
transports[3]
0{5}
kind: "package"
type: "stdio"
endpoint_url: null
endpoint_host: null
auth_type: "unknown"
1{5}
kind: "package"
type: "streamable-http"
endpoint_url: null
endpoint_host: null
auth_type: "unknown"
2{5}
kind: "remote"
type: "streamable-http"
endpoint_url: "https://biorxiv.caseyjhand.com/mcp"
endpoint_host: "biorxiv.caseyjhand.com"
auth_type: "none"
auth{3}
type: "none"
authorization_servers[0]
scopes[0]
protocol{4}
era: "modern"
negotiated_version: "2026-07-28"
supported_versions[0]
transport_type: "streamable-http"
tools[7]
0{9}
name: "biorxiv_get_fulltext"
title: "Get Preprint Full Text"
effect: "READ"
effect_confidence: 0.905
capabilities[1]
0{2}
capability: "EXTERNAL_COMMUNICATION"
confidence: 0.509
risk_severity: "INFO"
fingerprint: "40d192003946869db59887e95f24dead703a97b96130dde96bc46cbd0c60bfc8"
input_schema_fingerprint: "359c70bafdb39fa3bd76e3387c4e01c89bf93a297cd62be0eee14e65107a7663"
annotations{5}
title: null
readOnlyHint: true
destructiveHint: null
idempotentHint: null
openWorldHint: true
1{9}
name: "biorxiv_get_preprint"
title: "Get Preprint by DOI"
effect: "READ"
effect_confidence: 0.888
capabilities[0]
risk_severity: "INFO"
fingerprint: "e6cd0919010561bf1b0fe84ff74d8287edc013aeb80f646c66547b57c4aaebe9"
input_schema_fingerprint: "ec2ce5e98a2a5964fea353f1793b4e60ccacd4ae218a3bb5c833bb327ce876ce"
annotations{5}
title: null
readOnlyHint: true
destructiveHint: null
idempotentHint: true
openWorldHint: true
2{9}
name: "biorxiv_get_published_version"
title: "Get Published Journal Version"
effect: "READ"
effect_confidence: 0.866
capabilities[0]
risk_severity: "INFO"
fingerprint: "c36b978f46711d23d6c420261f3415fd015bed1a69b8308de330bc67177dbb5a"
input_schema_fingerprint: "1b1ff96b8fb6cb130e240f62d13e984ff250fcf56cd625588973c7d979a66d96"
annotations{5}
title: null
readOnlyHint: true
destructiveHint: null
idempotentHint: true
openWorldHint: true
3{9}
name: "biorxiv_list_categories"
title: "List bioRxiv/medRxiv Categories"
effect: "READ"
effect_confidence: 0.888
capabilities[0]
risk_severity: "INFO"
fingerprint: "15be25677adf857f7482ecdfeb8fca79c3b4581ccab23bdc223d41622312bf21"
input_schema_fingerprint: "71fc596a20f27da3dec80050e5d1f553eba34aea24c2853b853488a811e6b892"
annotations{5}
title: null
readOnlyHint: true
destructiveHint: null
idempotentHint: true
openWorldHint: false
4{9}
name: "biorxiv_list_published_versions"
title: "List Published Journal Versions"
effect: "READ"
effect_confidence: 0.866
capabilities[0]
risk_severity: "INFO"
fingerprint: "c9379a013fea8f69e36c6651db0fc9c1628e1a99133bc58907db7e5ad60ca304"
input_schema_fingerprint: "ec47547c1a6f4007e0913a0c8449810bdc0ba1bd3587037d65111eaae79db415"
annotations{5}
title: null
readOnlyHint: true
destructiveHint: null
idempotentHint: null
openWorldHint: true
5{9}
name: "biorxiv_list_recent"
title: "List Recent Preprints"
effect: "READ"
effect_confidence: 0.888
capabilities[0]
risk_severity: "INFO"
fingerprint: "37c5b5dd7fb892b076160605af897635ab4cd00040848e78cb810d8cd6e1db0c"
input_schema_fingerprint: "d8a12b7b19f6e7eafd10a3fdbeb598056b0458ddc2656f1c680a1babc6ac4c08"
annotations{5}
title: null
readOnlyHint: true
destructiveHint: null
idempotentHint: null
openWorldHint: true
6{9}
name: "biorxiv_search_preprints"
title: "Search Preprints by Keyword"
effect: "READ"
effect_confidence: 0.905
capabilities[0]
risk_severity: "INFO"
fingerprint: "d2191e7b431168350592fdb6b76890f489246ca4aeee4ede704b94d70ddb69c1"
input_schema_fingerprint: "efbdd6f98ae5fc51ac28e2ca3233bcf778b68b51a53955739a7e42df9c047162"
annotations{5}
title: null
readOnlyHint: true
destructiveHint: null
idempotentHint: null
openWorldHint: true
resources[2]
0{4}
key: "skill://biorxiv-guide/SKILL.md"
kind: "resource"
mime_type: "text/markdown"
fingerprint: "a748cc857180201df82e7ac14694773319af7d4f9bcff9248715cc097557a026"
1{4}
key: "skill://{+path}"
kind: "template"
mime_type: null
fingerprint: "9777dc7f1cf468158c157032a0ccebf9b50270f4e8753af9ccaf2fe99890ccf0"
prompts[0]
extensions[1]
0: "io.modelcontextprotocol/skills"
data{6}
privacy_completeness: "not_provided"
data_categories[0]
ai_training: null
retention_policy: null
processing_regions[0]
subprocessors[0]
external_integrations[1]
0{3}
host: "biorxiv.caseyjhand.com"
registrable_domain: "caseyjhand.com"
source: "transport"
findings[0]
trust{9}
registry_namespace: "verified_upstream"
publisher_identity: "unverified"
organization: "unverified"
domain: "unverified"
repository: "unverified"
source_provenance: "partial"
security_scan: "no_critical_findings"
privacy_transparency: "not_provided"
monitoring: "active"
provenance{4}
registry_name: "io.github.cyanheads/biorxiv-mcp-server"
registry_content_sha256: "8acf422398d76f95ecd1f50f97bccfc1ea21c0e1e2f023364142f6399413fd97"
scan_snapshot_fingerprint: "40f4e880736e0a75f9dfb8bafb071cf0bcebe33a5e67b356015c175507d1c891"
scanner_version: "1.0.0"
timestamps{4}
generated_at: "2026-11-15T02:15:02.585Z"
observed_at: "2026-11-08T16:28:39.185+00:00"
registry_published_at: "2026-10-29T17:19:48.787193+00:00"
registry_updated_at: null